- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os11g34080
Description : no hits & (original description: none)
Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G17680 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G45100 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g018161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054986 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107101 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39093 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12144 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01947 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g36114 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene62396.t1 | SBP1, Aspi01Gene62396 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0014.g013570 | SBP1 | not classified & original description: CDS=204-1397 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g77781 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g02764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g33928 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001126001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07205 | SBP1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20174 | SBP1 | Probable BOI-related E3 ubiquitin-protein ligase 2... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_24642g0020 | ACN1, AAE7 | Acetate/butyrate--CoA ligase AAE7, peroxisomal... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g00907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03464 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15278 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11240 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06772 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g00686 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13811 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005184_P001 | Zm00001e005184 | BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008274_P001 | Zm00001e008274 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024196_P001 | RING, Zm00001e024196 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024199_P001 | Zm00001e024199 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |