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  5. LOC_Os11g32500.1

LOC_Os11g32500.1 (LOC_Os11g32500)


Aliases : LOC_Os11g32500

Description : no hits & (original description: none)


Gene families : OG0004737 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g32500.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT5G51010 No alias Rubredoxin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g07702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00414.t2 Aspi01Gene00414 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_41477 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g32328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo146861 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc03g118130.3.1 Solyc03g118130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!