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  5. LOC_Os11g28490.1

LOC_Os11g28490.1 (LOC_Os11g28490)


Aliases : LOC_Os11g28490

Description : Stemod-13(17)-ene synthase OS=Oryza sativa subsp. indica (sp|q1ahb2|ksl11_orysi : 228.0)


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g28490.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Gb_38468 No alias Monofunctional pimaradiene synthase OS=Pinus banksiana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g52240.1 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Mp2g24640.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Pnu_g19221 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c21_15690V3.1 Pp3c21_15690 No annotation 0.02 OrthoFinder output from all 47 species
Zm00001e021192_P002 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Zm00001e040178_P002 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 1 109
No external refs found!