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  5. LOC_Os11g17930.1

LOC_Os11g17930.1 (LOC_Os11g17930)


Aliases : LOC_Os11g17930

Description : no hits & (original description: none)


Gene families : OG0000502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g17930.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00261000 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00034410 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G43340 No alias Protein of unknown function (DUF1685) 0.04 OrthoFinder output from all 47 species
Adi_g079642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g45065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24831.t1 Aspi01Gene24831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0167.g054472 No alias not classified & original description: CDS=1-825 0.02 OrthoFinder output from all 47 species
Cba_g25964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G015400.1 Ceric.23G015400 not classified & original description: pacid=50611152... 0.02 OrthoFinder output from all 47 species
Ehy_g18761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_29161g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013043 No alias component *(Pex7) of cargo-receptor system & original... 0.03 OrthoFinder output from all 47 species
Spa_g38879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015955_P001 Zm00001e015955 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e021360_P001 Zm00001e021360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012881 DUF1685 131 181
No external refs found!