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  5. LOC_Os11g06860.1

LOC_Os11g06860.1 (LOC_Os11g06860)


Aliases : LOC_Os11g06860

Description : no hits & (original description: none)


Gene families : OG0003394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g06860.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g074119 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species
Aob_g19129 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.03 OrthoFinder output from all 47 species
Ceric.29G045000.1 Ceric.29G045000 component *(HYC) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species
GSVIVT01029786001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_510666g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g15503 No alias component *(HYC) of phosphatidylinositol 4-kinase... 0.02 OrthoFinder output from all 47 species
Solyc10g047210.1.1 Solyc10g047210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016728_P003 Zm00001e016728 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR018619 Hyccin 59 391
No external refs found!