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  5. LOC_Os11g04560.1

LOC_Os11g04560.1 (LOC_Os11g04560)


Aliases : LOC_Os11g04560

Description : Probable calcium-binding protein CML36 OS=Arabidopsis thaliana (sp|q9ss31|cml36_arath : 85.1)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g04560.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AMTR_s00053p00122010 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML35 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G41410 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
AT3G03400 No alias EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
AT5G37770 TCH2, CML24 EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
Adi_g081283 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02825 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34437 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11000 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13968 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12792 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13188 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36096 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51502 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene14419.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16257.t1 Aspi01Gene16257 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30068.t1 Aspi01Gene30068 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40088.t1 Aspi01Gene40088 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009928 No alias calcium sensor *(CML) & original description: CDS=1-306 0.02 OrthoFinder output from all 47 species
Cba_g04492 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G075800.1 Ceric.18G075800 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.23G032400.1 TCH2, CML24,... calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g08581 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10925 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06703 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09860 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10743 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10805 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11523 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14256 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008421001 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea 0.04 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_37767 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os01g72100.1 LOC_Os01g72100 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g16905 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
MA_12364g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 OrthoFinder output from all 47 species
Mp2g14930.1 CML23 Probable calcium-binding protein CML23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Msp_g06515 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08155 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00479 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19481 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27721 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27722 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c9_25180V3.1 Pp3c9_25180 EF hand calcium-binding protein family 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009869 No alias calcium sensor *(CML) & original description: CDS=1-726 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0291.g027172 No alias calcium sensor *(CML) & original description: CDS=1-882 0.03 OrthoFinder output from all 47 species
Solyc02g091500.1.1 Solyc02g091500 Calcium-binding protein CML24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.07 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40909 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24320 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 128 190
No external refs found!