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  5. LOC_Os11g03730.3

LOC_Os11g03730.3 (ASD1, ATASD1, ARAF,...)


Aliases : ASD1, ATASD1, ARAF, ARAF1, LOC_Os11g03730

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)


Gene families : OG0002834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g03730.3

Target Alias Description ECC score Gene Family Method Actions
Aev_g24777 ASD1, ATASD1, ARAF, ARAF1 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Als_g52087 ASD1, ATASD1, ARAF, ARAF1 bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species
Aspi01Gene48582.t1 ASD1, ATASD1,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Dcu_g01880 ASD1, ATASD1, ARAF, ARAF1 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Zm00001e001505_P001 ASD1, ATASD1,... bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0046373 L-arabinose metabolic process IEA Interproscan
MF GO:0046556 alpha-L-arabinofuranosidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010720 Alpha-L-AF_C 457 641
No external refs found!