LOC_Os11g03540.1 (WRI1, ATWRI1, ASML1,...)

Aliases : WRI1, ATWRI1, ASML1, WRI, LOC_Os11g03540

Description : transcription factor (AP2)

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g03540.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00086450	ADAP,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00035p00205430	AP2, FLO2, FL1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00028460	BBM,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT3G54990	SMZ	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g030001	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Adi_g056777	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Adi_g088510	WRI1, ATWRI1, ASML1, WRI	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g25494	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ala_g33374	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g01822	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Als_g32143	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g47612	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Aob_g17577	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g20859	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g21389	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Aob_g27594	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Aop_g38906	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G054600.1	ADAP, Ceric.03G054600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G056200.1	PLT2, Ceric.10G056200	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.12G002600.1	Ceric.12G002600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.14G068200.1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G003300.1	PLT2, Ceric.26G003300	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.31G036600.1	Ceric.31G036600	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Dac_g06510	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dde_g19882	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g06863	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Gb_05487	DRG, CKC, CKC1, ANT	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os03g19900.1	AIL7, LOC_Os03g19900	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os05g32270.1	LOC_Os05g32270	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Len_g45546	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Len_g46694	AP2, FLO2, FL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g46832	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Lfl_g29068	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
MA_113625g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_86195g0010	PLT2	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Mp7g13270.1	ADAP	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Msp_g35360	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g28976	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ore_g04250	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g26951	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g45371	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g59880	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Sam_g37210	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Solyc03g117720.3.1	ADAP, Solyc03g117720	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc04g049800.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.06	OrthoFinder output from all 47 species
Solyc06g075510.4.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc09g007260.4.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.06	OrthoFinder output from all 47 species
Solyc11g072600.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Spa_g13908	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	83	142
IPR001471	AP2/ERF_dom	185	236

External Links

No external refs found!

LOC_Os11g03540.1 (WRI1, ATWRI1, ASML1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation