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  5. LOC_Os10g42710.1

LOC_Os10g42710.1 (AtRCD1, RCD1, ATP8,...)


Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO, LOC_Os10g42710

Description : Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana (sp|q8ry59|rcd1_arath : 249.0)


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42710.1

Target Alias Description ECC score Gene Family Method Actions
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.05 OrthoFinder output from all 47 species
Adi_g018771 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g056817 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g060192 SRO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g065990 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g085807 SRO2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112117 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72667.t1 SRO1, Aspi01Gene72667 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G015900.1 SRO3, Ceric.03G015900 organellar-signalling mediator *(RCD1) & original... 0.06 OrthoFinder output from all 47 species
Ceric.29G059600.1 AtRCD1, RCD1,... not classified & original description: pacid=50625179... 0.06 OrthoFinder output from all 47 species
Dac_g15956 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g19541 SRO2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17490 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01013086001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.06 OrthoFinder output from all 47 species
GSVIVT01013090001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Gb_12340 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
MA_5033617g0010 SRO1 Probable inactive poly [ADP-ribose] polymerase SRO1... 0.02 OrthoFinder output from all 47 species
Nbi_g05846 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g18220 AtRCD1, RCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06687 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g59913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g076420.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.02 OrthoFinder output from all 47 species
Tin_g08708 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e002482_P002 SRO1, Zm00001e002482 Inactive poly [ADP-ribose] polymerase RCD1... 0.12 OrthoFinder output from all 47 species
Zm00001e012999_P001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 507 571
No external refs found!