- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os10g42500
Description : Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica (sp|q7xbw5|pap3_orysj : 466.0)
Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G35490 | No alias | Plastid-lipid associated protein PAP / fibrillin family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g10976 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g39447 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g03723 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02332 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19138 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01687 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.17G059600.1 | FIB, Ceric.17G059600 | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g189300 | FIB | Plastid lipid-associated protein 2, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12841 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08272 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24089 | No alias | Fibrillin plastoglobule core protein *(FBN8) & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01013072001 | No alias | Probable plastid-lipid-associated protein 3,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_153977g0010 | No alias | Plastid-lipid-associated protein, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| MA_28715g0010 | No alias | Light-induced protein, chloroplastic OS=Solanum... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g09485 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g45290 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g09162 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62338 | No alias | Fibrillin plastoglobule core protein *(FBN8) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29401 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g005220.4.1 | Solyc08g005220 | Probable plastid-lipid-associated protein 3,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08959 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25315 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25316 | FIB | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002454_P001 | Zm00001e002454 | Probable plastid-lipid-associated protein 3,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e007939_P001 | Zm00001e007939 | Probable plastid-lipid-associated protein 2,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006843 | PAP/fibrillin_dom | 148 | 363 |
| No external refs found! |