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  5. LOC_Os10g40290.1

LOC_Os10g40290.1 (LOC_Os10g40290)


Aliases : LOC_Os10g40290

Description : Pectin acetylesterase 9 OS=Arabidopsis thaliana (sp|b9dfr3|pae9_arath : 355.0)


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g40290.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G46930 No alias Pectinacetylesterase family protein 0.01 OrthoFinder output from all 47 species
AT3G05910 No alias Pectinacetylesterase family protein 0.05 OrthoFinder output from all 47 species
AT3G09405 No alias Pectinacetylesterase family protein 0.04 OrthoFinder output from all 47 species
AT5G26670 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
Adi_g019164 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03040 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20025 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03038 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10411 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69681 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39886.t1 Aspi01Gene39886 pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51899.t1 Aspi01Gene51899 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07334 No alias pectin acetylesterase *(PAE) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g41074 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08706 No alias pectin acetylesterase *(PAE) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 OrthoFinder output from all 47 species
GSVIVT01036914001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Gb_04448 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Gb_06563 No alias pectin acetylesterase 0.06 OrthoFinder output from all 47 species
Gb_28228 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Gb_28230 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.08 OrthoFinder output from all 47 species
LOC_Os02g47400.1 LOC_Os02g47400 pectin acetylesterase 0.01 OrthoFinder output from all 47 species
Lfl_g13795 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39811 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
MA_3303g0010 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
MA_52077g0010 No alias pectin acetylesterase 0.05 OrthoFinder output from all 47 species
MA_8032g0010 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43584 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29610 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43083 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38138 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42320 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59674 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022387 No alias pectin acetylesterase *(PAE) & original description: CDS=96-1526 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024404 No alias not classified & original description: CDS=262-552 0.06 OrthoFinder output from all 47 species
Sam_g39303 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52027 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 OrthoFinder output from all 47 species
Smo447382 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
Solyc03g078260.3.1 Solyc03g078260 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g005800.4.1 Solyc08g005800 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g014380.3.1 Solyc08g014380 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g074990.3.1 Solyc08g074990 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g075030.3.1 Solyc08g075030 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g075060.4.1 Solyc08g075060 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc12g005320.3.1 Solyc12g005320 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc12g019440.3.1 Solyc12g019440 pectin acetylesterase 0.05 OrthoFinder output from all 47 species
Spa_g06322 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12342 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21771 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.08 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e027636_P001 Zm00001e027636 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e037910_P001 Zm00001e037910 pectin acetylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 77 208
IPR004963 PAE/NOTUM 226 374
No external refs found!