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  5. LOC_Os10g39900.1

LOC_Os10g39900.1 (LOC_Os10g39900)


Aliases : LOC_Os10g39900

Description : no hits & (original description: none)


Gene families : OG0002473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39900.1

Target Alias Description ECC score Gene Family Method Actions
AT4G01210 No alias glycosyl transferase family 1 protein 0.03 OrthoFinder output from all 47 species
Adi_g057047 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g057056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18374.t1 Aspi01Gene18374 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043134 No alias not classified & original description: CDS=1-3600 0.02 OrthoFinder output from all 47 species
Ceric.16G080800.1 Ceric.16G080800 not classified & original description: pacid=50589830... 0.04 OrthoFinder output from all 47 species
Lfl_g07849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020434_P002 Zm00001e020434 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037935_P003 Zm00001e037935 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!