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  5. LOC_Os10g39770.1

LOC_Os10g39770.1 (LOC_Os10g39770)


Aliases : LOC_Os10g39770

Description : NEP1-interacting protein 2 OS=Arabidopsis thaliana (sp|q8gt74|nip2_arath : 204.0)


Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39770.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT4G35840 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G66070 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g114538 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g01145 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00810.t1 Aspi01Gene00810 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001577 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43670.1 LOC_Os08g43670 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g02435 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e022538_P002 Zm00001e022538 NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024702_P002 Zm00001e024702 NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 188 216
No external refs found!