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Aliases : LOC_Os10g35930
Description : transcription factor (LIM)
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os10g35930.1 | |
| Cluster | HCCA: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00259550 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.LIM... | 0.1 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00168710 | WLIM1,... | RNA biosynthesis.transcriptional activation.LIM... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G01780 | No alias | GATA type zinc finger transcription factor family protein | 0.09 | OrthoFinder output from all 47 species | |
| AT1G10200 | WLIM1 | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39900 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G45800 | No alias | GATA type zinc finger transcription factor family protein | 0.12 | OrthoFinder output from all 47 species | |
| AT3G61230 | No alias | GATA type zinc finger transcription factor family protein | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g004397 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077331 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080585 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene19745.t1 | Aspi01Gene19745 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06316 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G067600.1 | WLIM1, Ceric.34G067600 | LIM-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g00402 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04716 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03324 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g05410 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27988 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007812001 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01016382001 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019807001 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01026849001 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037819001 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_09450 | No alias | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g13030.1 | WLIM1, LOC_Os06g13030 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14961 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428887g0010 | No alias | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05020 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g21254 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03273 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25515 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16596 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo229974 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g094320.3.1 | Solyc01g094320 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114000.3.1 | WLIM1, Solyc03g114000 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g049870.3.1 | Solyc05g049870 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g007940.4.1 | Solyc08g007940 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g080740.3.1 | Solyc08g080740 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g017520.3.1 | Solyc10g017520 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g044740.2.1 | WLIM1, Solyc11g044740 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g01071 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007423_P001 | Zm00001e007423 | transcription factor (LIM) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e015234_P001 | Zm00001e015234 | transcription factor (LIM) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e023098_P001 | Zm00001e023098 | transcription factor (LIM) | 0.18 | OrthoFinder output from all 47 species | |
| Zm00001e029431_P002 | WLIM1, Zm00001e029431 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041310_P001 | Zm00001e041310 | transcription factor (LIM) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| No external refs found! |