LOC_Os10g32810.1 (BAM1, BMY7, TR-BAMY,...)

Aliases : BAM1, BMY7, TR-BAMY, LOC_Os10g32810

Description : beta amylase

Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g32810.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g082770	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g05070	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g26312	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09045	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000343_P005	BAM1, BMY7,...	beta amylase	0.06	OrthoFinder output from all 47 species
Zm00001e012728_P005	BAM1, BMY7,...	beta amylase	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	76	497

External Links

No external refs found!