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  5. LOC_Os10g32300.1

LOC_Os10g32300.1 (LOC_Os10g32300)


Aliases : LOC_Os10g32300

Description : PYG7 protein involved in PS-I assembly


Gene families : OG0005614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g32300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00138060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Aev_g02975 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Aob_g01175 No alias protein involved in PS-I assembly *(PYG7) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene30664.t1 Aspi01Gene30664 protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Cba_g23451 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G019000.1 Ceric.03G019000 protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
Ceric.03G019100.1 Ceric.03G019100 not classified & original description: pacid=50572267... 0.1 OrthoFinder output from all 47 species
Cre12.g524300 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g11027 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08751 No alias protein involved in PS-I assembly *(PYG7) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01034503001 No alias Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder output from all 47 species
Gb_28677 No alias PYG7 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Len_g14837 No alias protein involved in PS-I assembly *(PYG7) & original... 0.08 OrthoFinder output from all 47 species
Lfl_g10429 No alias protein involved in PS-I assembly *(PYG7) & original... 0.04 OrthoFinder output from all 47 species
MA_133089g0010 No alias PYG7 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Mp2g07550.1 No alias PYG7 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Ore_g19021 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Pir_g15645 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g06172 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15480 No alias protein involved in PS-I assembly *(PYG7) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016391 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
Sam_g38233 No alias protein involved in PS-I assembly *(PYG7) & original... 0.05 OrthoFinder output from all 47 species
Smo90520 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Solyc11g017200.2.1 Solyc11g017200 PYG7 protein involved in PS-I assembly 0.09 OrthoFinder output from all 47 species
Zm00001e034869_P002 Zm00001e034869 PYG7 protein involved in PS-I assembly 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 306 337
No external refs found!