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  5. LOC_Os10g26110.1

LOC_Os10g26110.1 (LOC_Os10g26110)


Aliases : LOC_Os10g26110

Description : aromatic L-amino acid decarboxylase


Gene families : OG0003989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g26110.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00139650 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00229630 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00230050 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00055440 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00059730 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
AT2G20340 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 OrthoFinder output from all 47 species
GSVIVT01026384001 No alias Secondary metabolism.nitrogen-containing secondary... 0.05 OrthoFinder output from all 47 species
GSVIVT01026388001 No alias Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
Pir_g46804 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo121532 No alias Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
Solyc03g044120.1.1 Solyc03g044120 aromatic L-amino acid decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc07g054280.1.1 Solyc07g054280 aromatic L-amino acid decarboxylase 0.03 OrthoFinder output from all 47 species
Zm00001e000632_P001 Zm00001e000632 aromatic L-amino acid decarboxylase 0.05 OrthoFinder output from all 47 species
Zm00001e000634_P001 Zm00001e000634 aromatic L-amino acid decarboxylase 0.1 OrthoFinder output from all 47 species
Zm00001e021101_P001 Zm00001e021101 aromatic L-amino acid decarboxylase 0.05 OrthoFinder output from all 47 species
Zm00001e032101_P001 Zm00001e032101 aromatic L-amino acid decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 47 434
No external refs found!