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  5. LOC_Os10g21460.1

LOC_Os10g21460.1 (LOC_Os10g21460)


Aliases : LOC_Os10g21460

Description : associated component SAP30 of histone deacetylase machineries


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g21460.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g016707 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Adi_g042773 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Adi_g046047 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aev_g02770 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Als_g09801 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06861.t1 Aspi01Gene06861 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Cba_g07329 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ceric.07G066600.1 Ceric.07G066600 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dcu_g38581 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dde_g09451 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Len_g14311 No alias associated component *(AFR) of histone deacetylase... 0.07 OrthoFinder output from all 47 species
Mp7g07500.1 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Ore_g01493 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Pir_g00552 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Pnu_g00596 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Sam_g27843 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Sam_g30195 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 154 206
No external refs found!