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  5. LOC_Os10g19000.1

LOC_Os10g19000.1 (LOC_Os10g19000)


Aliases : LOC_Os10g19000

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g19000.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g74210.1 LOC_Os01g74210 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g16120.1 LOC_Os02g16120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g16590.1 LOC_Os02g16590 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g05860.1 LOC_Os04g05860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g19700.1 LOC_Os05g19700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g25160.1 LOC_Os07g25160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os09g12100.1 LOC_Os09g12100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os12g03770.1 LOC_Os12g03770 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os12g28740.1 LOC_Os12g28740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g31980.1 LOC_Os12g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 346 459
No external refs found!