LOC_Os10g01470.1 (HAT22, LOC_Os10g01470)

Aliases : HAT22, LOC_Os10g01470

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g01470.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.02	OrthoFinder output from all 47 species
Aev_g11311	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g49730	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g24193	HAT22	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g19759	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g23304	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Len_g11903	HAT14	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
MA_21460g0010	HAT14	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
Msp_g24274	HB4, ATHB-4, ATHB4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g35988	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Nbi_g18932	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Nbi_g29782	HAT14	HD-ZIP I/II-type transcription factor & original...	0.08	OrthoFinder output from all 47 species
Ore_g34915	HAT9	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g35413	HAT22	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Smo139631	HAT14	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Solyc02g063520.3.1	HAT22, Solyc02g063520	transcription factor (HD-ZIP I/II)	0.08	OrthoFinder output from all 47 species
Solyc08g078300.4.1	HB-2, ATHB2,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc10g080540.2.1	HAT14, Solyc10g080540	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
Tin_g15873	HB4, ATHB-4, ATHB4	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Zm00001e013141_P001	HAT22, Zm00001e013141	transcription factor (HD-ZIP I/II)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	93	147
IPR003106	Leu_zip_homeo	149	182

External Links

No external refs found!

LOC_Os10g01470.1 (HAT22, LOC_Os10g01470)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation