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  5. LOC_Os09g37967.1

LOC_Os09g37967.1 (LOC_Os09g37967)


Aliases : LOC_Os09g37967

Description : no hits & (original description: none)


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g37967.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Ala_g15564 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04891 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15952.t1 Aspi01Gene15952 Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15953.t1 Aspi01Gene15953 Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g10197 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01030613001 No alias Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
LOC_Os08g03410.1 CRU1, CRA1,... no description available(sp|a0a222nnm9|cos1_cocnu : 326.0) 0.05 OrthoFinder output from all 47 species
MA_28880g0020 CRU3, CRC 12S seed storage protein CRD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5751448g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25952 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001159 No alias Globulin-type seed storage protein & original... 0.03 OrthoFinder output from all 47 species
Sam_g06664 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g094110.3.1 Solyc01g094110 13S globulin seed storage protein 2 OS=Fagopyrum... 0.02 OrthoFinder output from all 47 species
Spa_g43375 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029593_P002 Zm00001e029593 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 9 121
IPR006045 Cupin_1 210 342
No external refs found!