LOC_Os09g33986.1 (PBG1, LOC_Os09g33986)


Aliases : PBG1, LOC_Os09g33986

Description : component beta type-7 of 26S proteasome


Gene families : OG0004102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g33986.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00154550 PBG1,... Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
AT1G56450 PBG1 20S proteasome beta subunit G1 0.04 OrthoFinder output from all 47 species
Adi_g007501 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aev_g44777 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Als_g30801 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g04985 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Azfi_s0350.g066539 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cba_g16284 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.43 PBG1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Cre06.g280850 PBG1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Dac_g00589 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dde_g21621 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Gb_09437 PBG1 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Lfl_g00637 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
MA_10427481g0010 PBG1 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Ore_g20507 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo271646 PBG1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Solyc11g069150.3.1 PBG1, Solyc11g069150 component beta type-7 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Spa_g16372 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Tin_g06402 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Zm00001e010160_P002 PBG1, Zm00001e010160 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e034696_P001 PBG1, Zm00001e034696 component beta type-7 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 36 223
No external refs found!