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  5. LOC_Os09g33460.1

LOC_Os09g33460.1 (LOC_Os09g33460)


Aliases : LOC_Os09g33460

Description : Double-stranded RNA-binding protein 5 OS=Oryza sativa subsp. japonica (sp|b7e321|drb5_orysj : 417.0)


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g33460.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 DRB3,... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT2G28380 DRB2 dsRNA-binding protein 2 0.03 OrthoFinder output from all 47 species
AT3G26932 DRB3 dsRNA-binding protein 3 0.08 OrthoFinder output from all 47 species
Ala_g14617 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g46566 DRB1, HYL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g20598 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene56636.t1 DRB1, HYL1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72544.t1 DRB2, Aspi01Gene72544 regulatory protein *(DRB2) of miRNA bioGenesis pathway &... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046351 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Azfi_s0132.g049221 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Cba_g07151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12454 DRB3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g16233 DRB3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g57509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G049600.1 DRB3, Ceric.11G049600 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Ceric.19G020000.1 DRB2, Ceric.19G020000 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Ceric.19G040500.1 DRB2, Ceric.19G040500 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.07 OrthoFinder output from all 47 species
Dac_g13517 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dac_g37632 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Dac_g45579 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Dcu_g07067 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ehy_g01059 DRB5 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033035001 DRB3 Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Len_g50914 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
MA_15142g0010 DRB2 Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_693782g0010 DRB1, HYL1 component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.03 OrthoFinder output from all 47 species
Mp3g18950.1 DRB2 Double-stranded RNA-binding protein 5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g13381 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Msp_g32265 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Nbi_g30498 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Pir_g16548 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ppi_g63219 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008465 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Smo441949 DRB2 Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc01g009190.3.1 DRB3, Solyc01g009190 Double-stranded RNA-binding protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc03g118950.3.1 Solyc03g118950 Double-stranded RNA-binding protein 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Spa_g52122 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Zm00001e010132_P001 DRB3, Zm00001e010132 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 2 68
IPR014720 dsRBD_dom 88 153
No external refs found!