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  5. LOC_Os09g32690.2

LOC_Os09g32690.2 (LOC_Os09g32690)


Aliases : LOC_Os09g32690

Description : no hits & (original description: none)


Gene families : OG0001563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32690.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g011371 RMA1, ATRMA1 E3 ubiquitin ligase *(STUBL1/3) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09781 No alias E3 ubiquitin ligase *(STUBL1/3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31372 No alias E3 ubiquitin ligase *(STUBL1/3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29049 No alias E3 ubiquitin ligase *(STUBL1/3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11732 No alias E3 ubiquitin ligase *(STUBL1/3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48571 No alias E3 ubiquitin ligase *(STUBL1/3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010111_P001 Zm00001e010111 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034616_P002 Zm00001e034616 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!