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  5. LOC_Os09g32100.1

LOC_Os09g32100.1 (LOC_Os09g32100)


Aliases : LOC_Os09g32100

Description : no hits & (original description: none)


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32100.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00255260 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00002p00255400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G46060 No alias Protein of unknown function, DUF599 0.03 OrthoFinder output from all 47 species
Als_g21060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25945.t1 Aspi01Gene25945 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25946.t1 Aspi01Gene25946 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51507.t2 Aspi01Gene51507 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1197.g099364 No alias not classified & original description: CDS=1-918 0.03 OrthoFinder output from all 47 species
Ceric.03G050400.1 Ceric.03G050400 not classified & original description: pacid=50572511... 0.02 OrthoFinder output from all 47 species
Ceric.27G044500.1 Ceric.27G044500 not classified & original description: pacid=50605903... 0.02 OrthoFinder output from all 47 species
Dac_g17408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014262001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
GSVIVT01034340001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035558001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_09348 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_09350 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_38230 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38231 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g49030.1 LOC_Os01g49030 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os08g40940.1 LOC_Os08g40940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g05628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_879701g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023064 No alias not classified & original description: CDS=642-1325 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023071 No alias not classified & original description: CDS=695-1528 0.02 OrthoFinder output from all 47 species
Smo101278 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo105772 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g077540.4.1 Solyc02g077540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g077550.4.1 Solyc02g077550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g079980.2.1 Solyc03g079980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g074950.2.1 Solyc10g074950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g040460.2.1 Solyc12g040460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g096310.2.1 Solyc12g096310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g01090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020142_P001 Zm00001e020142 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034570_P003 Zm00001e034570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 11 232
No external refs found!