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LOC_Os09g31019.1 (LOC_Os09g31019)


Aliases : LOC_Os09g31019

Description : component RPL40 of LSU proteome component


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g31019.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cba_g75597 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_57988g0010 UBQ4 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Pp3c24_430V3.1 Pp3c24_430 ubiquitin extension protein 1 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR001975 Ribosomal_L40e 85 132
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!