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  5. LOC_Os09g29950.3

LOC_Os09g29950.3 (LOC_Os09g29950)


Aliases : LOC_Os09g29950

Description : no hits & (original description: none)


Gene families : OG0001691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29950.3

Target Alias Description ECC score Gene Family Method Actions
Adi_g080765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65924.t1 Aspi01Gene65924 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66743.t1 Aspi01Gene66743 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429264g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g38307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g050240.4.1 Solyc02g050240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g46281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001375 Peptidase_S9 284 496
No external refs found!