LOC_Os09g29460.1 (ATHB5, ATHB-5, HB5,...)

Aliases : ATHB5, ATHB-5, HB5, LOC_Os09g29460

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g29460.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267430	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AT2G36610	ATHB22, HB22	homeobox protein 22	0.04	OrthoFinder output from all 47 species
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.03	OrthoFinder output from all 47 species
Adi_g020723	HB51, ATHB51, LMI1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g082074	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Adi_g082075	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g111379	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g116604	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g116605	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g09308	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g25617	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ala_g16211	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g31747	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g10561	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g32740	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g009635	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g009821	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g13182	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Cba_g16857	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.14G007200.1	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g04639	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g07382	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g08275	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g08737	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g20942	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
MA_130615g0020	HB6, ATHB6	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
MA_441783g0010	AtHB23, HB23	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g09793	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g04447	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g17854	ATHB3, HB-3, ATHB-3, HAT7	regulatory protein *(LMI1) of floral meristem identity...	0.01	OrthoFinder output from all 47 species
Ore_g21633	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g26580	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g36363	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g22217	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g29089	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g41475	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g02749	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.05	OrthoFinder output from all 47 species
Pnu_g19038	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Smo18217	ATHB16, HB16, ATHB-16	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Solyc02g086930.4.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc03g082550.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc04g005800.3.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Spa_g18476	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g18815	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g24644	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g01589	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e022379_P002	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e034433_P001	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	106	147
IPR001356	Homeobox_dom	51	104

External Links

No external refs found!

LOC_Os09g29460.1 (ATHB5, ATHB-5, HB5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation