- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATPUP3, PUP3, LOC_Os09g29210
Description : organic cation transporter (PUP)
Gene families : OG0000721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000721_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g29210.1 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00135p00097090 | PUP1, ATPUP1,... | Solute transport.carrier-mediated transport.DMT... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00135p00099660 | PUP1, ATPUP1,... | Solute transport.carrier-mediated transport.DMT... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G28230 | PUP1, ATPUP1 | purine permease 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18190 | PUP6, ATPUP6 | purine permease 6 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18197 | PEX17, ATPUP7, PUP7 | purine permease 7 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G18205 | No alias | Nucleotide-sugar transporter family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G18210 | ATPUP10, PUP10 | purine permease 10 | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11388 | ATPUP3, PUP3 | organic cation transporter *(PUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60644.t1 | ATPUP3, PUP3,... | organic cation transporter *(PUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0057.g034276 | PUP1, ATPUP1 | organic cation transporter *(PUP) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.04G055300.1 | PUP1, ATPUP1,... | organic cation transporter *(PUP) & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018360001 | ATPUP11, PUP11 | Solute transport.carrier-mediated transport.DMT... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g46380.1 | ATPUP11, PUP11,... | organic cation transporter (PUP) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02798 | ATPUP11, PUP11 | organic cation transporter *(PUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14493 | ATPUP5, PUP5 | organic cation transporter *(PUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06269 | ATPUP11, PUP11 | organic cation transporter *(PUP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12110 | ATPUP3, PUP3 | organic cation transporter *(PUP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006494 | PUP1, ATPUP1 | organic cation transporter *(PUP) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0135.g022354 | ATPUP3, PUP3 | organic cation transporter *(PUP) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0171.g024388 | PUP1, ATPUP1 | organic cation transporter *(PUP) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo417455 | ATPUP5, PUP5 | Solute transport.carrier-mediated transport.DMT... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g008440.3.1 | ATPUP3, PUP3,... | organic cation transporter (PUP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g087870.2.1 | PUP1, ATPUP1,... | organic cation transporter (PUP) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g37527 | PUP1, ATPUP1 | organic cation transporter *(PUP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009987_P001 | ATPUP3, PUP3,... | organic cation transporter (PUP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034411_P001 | ATPUP3, PUP3,... | organic cation transporter (PUP) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |