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  5. LOC_Os09g26420.5

LOC_Os09g26420.5 (RAP2.12, LOC_Os09g26420)


Aliases : RAP2.12, LOC_Os09g26420

Description : transcription factor (ERF)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26420.5
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT1G22985 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Als_g18227 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72130.t1 TINY2, Aspi01Gene72130 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0075.g037615 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g04461 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G021800.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g06752 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12477 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dde_g48050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g08536 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Nbi_g11606 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Pir_g09597 CRF4 subgroup ERF-VI transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ppi_g63080 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Spa_g39435 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49731 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g52130 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 135 184
No external refs found!