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  5. LOC_Os09g21340.1

LOC_Os09g21340.1 (LOC_Os09g21340)


Aliases : LOC_Os09g21340

Description : solute transporter (NAT)


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g21340.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00243580 PDE135,... Solute transport.carrier-mediated transport.APC... 0.01 OrthoFinder output from all 47 species
AT5G25420 No alias Xanthine/uracil/vitamin C permease 0.02 OrthoFinder output from all 47 species
LOC_Os03g48810.1 LOC_Os03g48810 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Zm00001e034024_P005 Zm00001e034024 solute transporter (NAT) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 36 440
No external refs found!