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  5. LOC_Os09g20930.1

LOC_Os09g20930.1 (LOC_Os09g20930)


Aliases : LOC_Os09g20930

Description : no hits & (original description: none)


Gene families : OG0003148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g20930.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00234310 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g03802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14558 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g36497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo444640 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc12g087960.2.1 Solyc12g087960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g04817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009764_P001 Zm00001e009764 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e034001_P001 Zm00001e034001 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!