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  5. LOC_Os09g15960.1

LOC_Os09g15960.1 (LOC_Os09g15960)


Aliases : LOC_Os09g15960

Description : no hits & (original description: none)


Gene families : OG0010324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g15960.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g72030.1 LOC_Os01g72030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g02590.1 LOC_Os11g02590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 371 387
IPR005162 Retrotrans_gag_dom 184 276
No external refs found!