Heatmap: Cluster_137 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g24350.1 (LOC_Os01g24350)
-5.32 2.77 -1.79 -0.78 1.46 1.05 -1.33 -1.64 - 1.4 2.86 -0.46 - - - - - -1.34 - -2.25 - - -4.87 - - - - - - - - - - - -0.09 - - - - - - - - 0.47 2.77 3.94 - - -
LOC_Os01g62450.1 (LOC_Os01g62450)
- 1.42 2.8 -0.51 - - -1.38 - - - 4.11 0.39 0.51 - - - 2.19 -0.6 - -3.11 - - - - - - - - - - - - - - - - - - - - - - - 3.06 1.2 1.2 - - -
LOC_Os02g03770.1 (LOC_Os02g03770)
1.66 1.9 - - - - - - 4.57 - 3.5 - - - - - - 1.99 - - 0.65 - - 0.61 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g04590.1 (LOC_Os02g04590)
-1.44 -1.78 -0.87 -3.57 -0.85 0.5 -1.91 0.62 0.47 -2.18 1.95 0.3 -1.87 -2.27 - -1.68 -1.08 -1.02 0.95 -0.16 -0.38 -0.61 -0.61 0.9 1.55 -0.77 -1.72 0.12 -0.65 -0.37 -1.26 -0.11 -1.06 -1.22 -0.28 -0.1 -1.78 0.59 -0.17 -0.4 -0.23 -0.12 -0.15 1.93 2.2 1.69 -2.95 -1.83 -2.28
LOC_Os02g05800.1 (LOC_Os02g05800)
-3.1 3.68 1.68 1.67 - 2.8 - -1.53 -0.19 - 1.93 1.08 - 0.67 - - - - - -3.75 - -3.11 - -2.54 1.87 - - - - - - -0.23 - - - - - - - - - - - -2.23 - - 2.68 1.29 -
LOC_Os02g27080.1 (LOC_Os02g27080)
1.64 4.65 - - - - - - - 1.52 3.47 2.35 - - - - - - - - - - - 0.75 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g33390.1 (LOC_Os02g33390)
-2.33 1.35 - 2.28 -0.92 - -0.42 -3.79 1.99 1.29 2.73 - - - - - - -0.39 - - -4.03 -4.28 - -3.59 - - - - - - - - - - - - - - - - - - - -1.48 - 0.54 4.1 2.83 -
LOC_Os03g08590.1 (LOC_Os03g08590)
1.4 1.99 - - - 1.84 1.15 -0.32 1.25 -1.15 2.41 2.62 -0.03 - - - -1.11 -0.5 - 0.2 - - - -1.92 3.54 - 1.15 - - - - - - - - - - - 1.83 - - - - -0.96 - - - - -
LOC_Os03g12920.1 (LOC_Os03g12920)
1.91 2.62 -2.19 - - - - -1.54 - -3.36 1.47 - - - - - - 0.21 2.94 0.14 - - - - 3.35 - - - - - - -1.82 - - - - - - - - - - - -3.81 2.5 3.25 - - -
LOC_Os03g16550.1 (LOC_Os03g16550)
-0.43 3.02 -2.3 3.15 0.16 2.57 -2.36 -0.29 - -0.33 0.6 - -0.99 0.5 - 1.0 -0.13 -1.83 2.71 -1.26 -2.01 - -3.62 - 1.14 - - - - - - - - - - - - - - -2.43 -2.16 - -1.77 -1.76 -0.35 -0.86 1.66 -0.78 -
LOC_Os03g40300.1 (LOC_Os03g40300)
-1.26 0.02 1.62 -0.83 -3.24 -2.84 0.71 1.39 -0.83 -0.95 0.63 1.36 0.12 -0.64 1.07 0.09 -2.59 -0.33 1.24 0.2 - - - -6.49 -1.37 -3.02 -0.79 - - - - - - - - - - - -2.84 -6.45 -5.86 -5.48 - 1.45 3.52 3.23 - - -
LOC_Os03g41400.1 (LOC_Os03g41400)
2.05 3.17 - - - - - - -1.86 - 2.15 - 0.22 3.19 2.24 - -2.34 -1.18 2.95 -0.36 - -2.56 -2.0 - 2.29 - - - - - - - - - - - - - - -3.5 - - - -2.61 -0.33 -0.54 - - -
LOC_Os03g42930.1 (LOC_Os03g42930)
1.9 1.73 -1.49 -2.41 2.04 1.12 -1.84 -1.89 -0.17 -0.46 -0.12 0.14 -1.35 2.49 - - 0.0 0.27 0.1 -0.1 -2.35 -1.46 -2.04 -1.72 -0.56 -0.45 -1.32 - -0.17 -2.51 - -0.48 -1.19 -2.23 -1.03 -2.73 0.16 -0.85 -0.72 -1.98 -0.39 -4.04 -1.63 1.15 -0.24 -1.38 0.26 1.38 1.94
LOC_Os04g02200.1 (LOC_Os04g02200)
3.25 3.46 -1.07 -2.53 0.51 - - -3.6 - -0.85 0.84 -0.42 -0.46 2.75 2.36 - 0.01 -0.9 - -0.8 -2.85 - -3.03 -2.61 - 0.29 0.44 - - - - 0.5 - 0.02 -0.06 - - - - -3.86 - - - - -0.64 -1.46 - 0.12 -
LOC_Os04g09270.1 (LOC_Os04g09270)
-4.1 4.63 -2.34 - - - - -2.54 - - 0.66 -0.77 - 3.86 - - - - - - - -1.44 - -1.42 - - - - - - - 1.08 - - - - - 1.19 - - - - - -3.62 0.03 -0.4 - - -
LOC_Os05g14770.1 (LOC_Os05g14770)
-0.0 4.79 - 1.14 - 0.84 - -1.76 1.2 -1.01 1.3 - - 1.09 - - - -2.82 - -1.45 - - - -1.77 - - - - - - - 1.86 - - - - - 1.97 - - - - - -1.84 - - - - -
LOC_Os05g48190.1 (LOC_Os05g48190)
3.49 5.0 - - - - - - - - 1.45 1.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.46 - - - - -
LOC_Os05g51970.1 (LOC_Os05g51970)
-3.07 4.47 - 0.5 -0.41 - - - - - 3.04 - - 3.23 - - 2.05 -1.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.22 - - -
LOC_Os06g10540.1 (LOC_Os06g10540)
-0.84 4.65 1.54 - - - - - 2.97 0.59 3.12 - - - - - - - - - - - - 1.23 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os06g43740.1 (LOC_Os06g43740)
0.57 2.6 -2.48 - - -0.73 -1.26 -2.13 -0.02 -0.58 0.54 -1.54 - - - - -1.97 -1.23 5.1 - - -4.7 - - - - - - - - - -1.83 - - - - - - - - - - -3.34 - -0.34 -1.64 - - -
LOC_Os06g47280.1 (LOC_Os06g47280)
-0.05 2.29 - -2.13 -1.47 -1.45 -0.55 -1.24 -2.37 -4.29 -0.34 - - -0.91 - - -2.15 -2.83 5.18 -3.08 - - - -3.31 - - - - - - - -2.75 - - - - - - - - - - - - - - 0.79 -0.47 -
LOC_Os07g36580.1 (LOC_Os07g36580)
0.75 1.12 -0.05 -2.87 0.31 1.33 -0.02 -0.42 0.04 0.84 1.35 -0.42 -2.27 -2.63 -2.05 - -1.3 -2.09 - 1.44 -2.18 -1.2 -2.16 -0.2 2.2 1.39 1.6 -0.43 -2.6 -2.07 -2.52 -0.72 -3.21 -2.59 - - - -1.59 -1.55 -2.28 -0.96 -2.67 -2.05 2.85 -0.33 -1.05 1.49 -0.01 -2.13
LOC_Os07g44600.1 (LOC_Os07g44600)
-0.12 1.9 - 0.13 -1.45 3.6 - - 0.77 -1.3 1.57 0.63 - 0.15 - - - 0.38 - -1.74 -1.49 - -1.37 -2.67 2.45 2.07 - - - 1.15 - - - - - - - - - - -0.68 - - - 0.86 1.48 - 1.77 -
LOC_Os08g06760.1 (LOC_Os08g06760)
0.4 3.86 -0.24 - -0.36 -0.38 -2.79 - 1.29 - 0.76 0.84 - 3.69 2.57 - -3.05 -0.08 - -2.04 - - - -0.79 - 1.15 0.27 - - - - - - - - - - - - -2.9 -3.4 -1.99 - - - - - - -
LOC_Os08g21060.1 (LOC_Os08g21060)
-3.42 3.72 - - 0.68 - -2.72 -2.71 - 0.5 1.78 -0.07 1.94 3.19 - - - 1.92 - -1.02 -3.3 -3.16 -1.31 1.49 - - - - - 0.74 - 1.51 - - - - - - - - - -2.25 - 0.93 - -0.57 - - -
LOC_Os08g24130.1 (LOC_Os08g24130)
4.59 3.37 - - - 0.46 - - - - -3.31 - - 0.71 - - - -0.95 - -3.6 -1.41 - -2.2 - - - - - - - -0.47 -1.99 1.05 1.27 - -0.19 0.94 - -0.38 -2.93 -0.56 -2.42 -1.92 - - - - - -
LOC_Os08g26040.1 (LOC_Os08g26040)
-0.13 1.18 -1.72 -0.87 -5.71 -2.55 -0.78 -0.75 -2.89 -1.51 2.92 -2.26 -2.23 2.96 -4.55 -1.06 -0.53 -1.91 -1.56 0.42 0.54 -2.27 -1.97 -2.26 -0.71 -0.53 -0.62 -0.17 0.28 -0.01 0.14 0.68 0.3 -0.75 -0.11 0.82 0.52 0.47 -0.04 -1.13 -0.61 -0.36 -0.22 0.07 -0.56 -0.54 -2.75 -1.25 -1.75
LOC_Os08g32110.1 (LOC_Os08g32110)
1.01 1.16 -2.51 -1.84 - - - -0.24 2.52 - 1.76 - 2.78 2.92 0.5 - 1.06 0.24 - 1.64 - -4.08 - - 0.52 1.41 - -0.44 - - - -0.26 - - - - - - - - -4.53 - -3.33 1.3 -0.91 -0.15 1.23 - -
LOC_Os08g32900.1 (LOC_Os08g32900)
3.87 3.35 -0.6 - - - - - 1.44 -2.87 1.13 -0.85 - - - - - 0.02 - -3.61 - - -1.81 - - - - - - 1.71 - - - - 0.67 - - - - - -3.22 - - 1.14 1.97 -0.48 1.3 1.2 -
LOC_Os09g11950.1 (LOC_Os09g11950)
-2.42 3.87 - - - 3.8 - - -1.86 - 0.32 - -0.8 3.68 - - - -4.49 - -4.37 -2.41 -3.44 - -2.62 - - - - - 0.29 - 1.32 - - - - - - - - -1.88 -2.31 -0.91 -3.07 - - - - -
LOC_Os09g15960.1 (LOC_Os09g15960)
0.03 2.44 -1.73 -3.94 -1.15 2.81 -0.86 -0.29 0.31 2.4 2.93 2.26 -0.08 1.79 - -1.43 0.68 -0.64 - 0.22 -5.58 -4.37 -3.56 -1.91 - -2.85 -2.8 -2.34 - - - -0.37 - -2.16 -2.24 -1.59 -2.65 - - -25.18 -4.09 -3.22 -5.09 -0.45 -0.92 -0.51 -0.33 -1.17 -1.96
LOC_Os09g17520.1 (LOC_Os09g17520)
-0.46 4.01 0.95 -0.29 - - -2.15 -2.14 0.48 - 2.03 1.86 - 3.52 - - - -0.64 - 0.2 -2.89 -1.74 -3.12 -2.96 - - - - - - - - - - - - - - - -2.21 - - - -0.25 1.76 - - 0.59 -
LOC_Os09g30390.1 (LOC_Os09g30390)
2.06 1.91 -1.17 - - - - - 2.12 0.41 2.39 -1.17 -0.72 -0.08 - 1.42 1.5 -0.17 - -0.09 -2.32 -3.2 -3.64 -3.12 3.79 - - - - - - -1.64 - - - - - - - - -2.38 - - -1.01 -0.34 -0.36 1.81 - -
LOC_Os09g37140.1 (LOC_Os09g37140)
-1.96 - - - - - - - - - 3.67 -2.08 - 4.58 - - 1.96 - - -0.35 0.84 -2.94 -1.88 - - - - - - - - - - - - - - - - -4.9 -0.15 - 1.78 - - - -0.74 - -
LOC_Os10g10390.1 (LOC_Os10g10390)
-2.41 4.36 - 0.25 3.21 3.77 - - -0.38 - 0.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.1 - - - -
LOC_Os10g18704.1 (LOC_Os10g18704)
0.31 5.06 - - - 2.99 - - - - 2.33 - - - - - - - - -4.34 - - -0.99 - - - - - - - - - - - - - - - - - - - - -0.31 - - - - -
LOC_Os10g20300.1 (LOC_Os10g20300)
-1.39 4.19 - -1.55 - 1.03 - -2.72 0.29 -1.96 0.8 - - 4.41 - - -0.56 -2.59 - -2.24 - - - - - - - - - - - - - - - - - - - - - - - -2.59 - - - 1.11 -
LOC_Os10g24770.1 (LOC_Os10g24770)
3.8 3.61 - -5.67 -5.8 -2.19 - -5.74 - -4.4 -4.14 -4.98 -4.86 4.11 -2.37 -0.78 -1.95 1.83 - -4.07 -7.15 - - -4.43 - - - - - - - -3.12 - -3.12 - - - - - - -6.3 - - -3.59 -3.74 - - - -
LOC_Os10g29350.1 (LOC_Os10g29350)
-4.02 2.83 - 0.51 - 3.33 - - - -2.51 2.35 1.76 - - 2.11 - -2.3 -1.01 - - - 0.08 0.66 -1.25 - 0.59 - - - - - 1.62 - - - - - - - - - - - - - 3.17 - - -
LOC_Os10g32670.1 (LOC_Os10g32670)
2.54 3.07 0.67 -3.16 -1.94 0.38 - - -1.17 2.22 1.87 0.9 -1.35 1.63 0.14 - 0.5 -0.82 - 0.76 -2.73 -2.32 - -2.78 0.27 0.68 -0.21 - - 0.65 -0.94 -0.74 - - - -0.04 - -1.25 - - -3.12 -3.95 - -1.84 0.29 1.43 - - -
LOC_Os10g33850.1 (EXO70F1)
0.17 2.67 - - - 1.06 1.2 0.62 0.37 -2.48 1.51 1.88 0.97 0.99 - - -1.69 1.49 - -0.04 -0.27 -3.26 -0.63 -0.79 2.23 0.72 0.1 0.51 - - -0.88 0.35 - - - - - -0.84 - -3.82 -0.8 -1.55 -1.33 0.39 -0.91 -0.25 0.1 0.0 -
LOC_Os10g36010.1 (LOC_Os10g36010)
0.49 3.69 - -1.08 - - - - 0.68 -2.18 0.86 - - - - - - -0.41 4.12 0.51 -5.18 - -1.64 -1.26 - 2.06 2.41 - - - - - - - -1.22 - - - - - - - - - - - -1.67 - -
LOC_Os11g13900.1 (LOC_Os11g13900)
- 3.75 - - - 0.73 - - 0.88 - 2.14 2.14 - 2.61 - - - - - - -1.18 - -0.87 - - - - -0.31 - 1.26 -0.58 1.79 0.74 - -0.23 - 1.39 -0.54 0.21 -0.35 -2.12 -2.09 -0.95 - - - - - -
LOC_Os11g14290.1 (LOC_Os11g14290)
2.28 2.77 - - - - 1.02 2.15 3.6 1.63 3.02 - - - - - -0.17 -0.28 - -3.52 - -1.57 - -3.12 - - 0.77 - - - - - - - - - - - - -1.81 - - - -1.07 0.3 - 0.63 - -
LOC_Os11g20430.1 (LOC_Os11g20430)
3.41 3.62 -1.61 -2.37 - 1.15 -3.25 1.17 - 0.8 1.11 - 1.4 2.72 - - -0.03 0.53 - -5.41 -3.66 - - -4.08 1.16 - - - - - - -1.95 - - - - - - - -3.77 -3.95 - - 0.42 -0.67 -0.67 - - -
LOC_Os11g34960.1 (LOC_Os11g34960)
1.86 3.26 0.1 - 0.06 - 0.41 -2.11 - 2.23 2.42 - 2.82 2.52 - - 2.08 0.86 - 0.19 - - - - - - - - - - - - - - - - - - - - - - - -2.11 - 0.91 - - -
LOC_Os11g35000.1 (LOC_Os11g35000)
1.78 2.57 3.38 - - 1.52 3.79 - - -1.32 2.59 1.69 - - - - - 0.0 - - - - - - - - - - - - - 0.22 - - - - - - - - - -0.49 - - - - - - -
LOC_Os11g38830.1 (LOC_Os11g38830)
1.33 2.21 - - - - - - 0.24 - 0.25 - - 0.98 - - -0.82 0.16 4.84 - - - - -1.83 - 2.69 - - - - - - - - - - - - - -1.33 - - - - - - - - -
-0.1 1.55 - -2.48 - 1.02 -1.52 -5.02 -2.65 0.2 2.02 -1.05 -3.14 -1.82 - -0.66 -2.29 -0.83 - -2.31 -3.3 -3.6 -3.62 -4.54 3.8 -0.05 - - - - -0.14 -3.72 - - - -1.83 - - - -3.63 -3.23 -3.43 - 3.32 1.27 -0.45 1.46 1.11 -
LOC_Os12g11950.1 (LOC_Os12g11950)
0.87 3.91 - - - 1.44 - - - - 1.22 0.33 - - - - - -3.72 4.63 - - - - - - - - - - - - -0.14 - - - - - - - - - - - -2.51 - - - - -
LOC_Os12g17790.1 (LOC_Os12g17790)
- 2.76 - - - - -1.71 - -0.56 0.54 1.38 - - 5.19 - - - - - - - - - - - - - - - - - -0.41 - - - - - - - - - - - - - - - - -
LOC_Os12g40710.1 (LOC_Os12g40710)
- 4.25 - - - - - - - 3.88 3.57 - - - - - - - - - - - -1.05 - - - - - - - - 1.49 - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.