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  5. LOC_Os09g12840.1

LOC_Os09g12840.1 (LOC_Os09g12840)


Aliases : LOC_Os09g12840

Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 98.6)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g12840.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Aev_g07692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g07039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17823 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g03828 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_23451 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37285 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g38049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_120951g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012180 No alias not classified & original description: CDS=1-1593 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 112 533
No external refs found!