1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g12270.1

LOC_Os09g12270.1 (LOC_Os09g12270)


Aliases : LOC_Os09g12270

Description : protein folding catalyst (FKBP)


Gene families : OG0000169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g12270.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00035680 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.05 OrthoFinder output from all 47 species
Cba_g25374 FKBP15-1 peptidyl-prolyl cis-trans isomerase *(FKBP15-1/2) &... 0.02 OrthoFinder output from all 47 species
Ceric.05G085900.1 FKBP12,... peptidyl-prolyl cis-trans isomerase *(FKBP12) & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G067700.1 FKBP15-2, Ceric.35G067700 peptidyl-prolyl cis-trans isomerase *(FKBP15-1/2) &... 0.02 OrthoFinder output from all 47 species
Dac_g06716 FKBP15-2 peptidyl-prolyl cis-trans isomerase *(FKBP15-1/2) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01005148001 FKBP15-1 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
GSVIVT01038075001 No alias Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Sam_g37835 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.02 OrthoFinder output from all 47 species
Zm00001e033723_P005 ATFKBP53,... protein folding catalyst (FKBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 329 416
IPR041232 NPL 3 95
No external refs found!