LOC_Os09g10930.2 (LOC_Os09g10930)

Aliases : LOC_Os09g10930

Description : SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana (sp|q94c11|sugp1_arath : 314.0)

Gene families : OG0003862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003862_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g10930.2
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017533	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07891	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.35G060400.1	Ceric.35G060400	not classified & original description: pacid=50581410...	0.06	OrthoFinder output from all 47 species
Cre16.g686000	No alias	SURP and G-patch domain-containing protein 1-like...	0.01	OrthoFinder output from all 47 species
Gb_28017	No alias	SURP and G-patch domain-containing protein 1-like...	0.05	OrthoFinder output from all 47 species
Len_g50229	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g29883	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g14465	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e035331_P002	Zm00001e035331	SURP and G-patch domain-containing protein 1-like...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008318	protein prenyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0018342	protein prenylation	IEP	HCCA
BP	GO:0097354	prenylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000061	Surp	147	197
IPR000467	G_patch_dom	349	392

External Links

No external refs found!