LOC_Os08g45130.1 (SET22, SDG22, SUVH9,...)

Aliases : SET22, SDG22, SUVH9, LOC_Os08g45130

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. SUVH2/9 methyl-DNA-binding factor of DNA methylation pathway

Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g45130.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00104700	SUVH5, SGD9,...	Chromatin organisation.histone modifications.histone...	0.02	OrthoFinder output from all 47 species
AMTR_s00069p00076340	SDG33, SUVH4,...	Enzyme classification.EC_2 transferases.EC_2.1...	0.08	OrthoFinder output from all 47 species
Aop_g06509	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aop_g10763	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ceric.32G043200.1	SUVH1, Ceric.32G043200	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Cre02.g089200	SDG23, SUVH6	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.02	OrthoFinder output from all 47 species
Ehy_g07008	ATSUVH2, SDG3, SUVH2	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
GSVIVT01025844001	SUVH1	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.03	OrthoFinder output from all 47 species
GSVIVT01027376001	SUVH1	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.05	OrthoFinder output from all 47 species
GSVIVT01032986001	SDG33, SUVH4, KYP	Chromatin organisation.histone modifications.histone...	0.02	OrthoFinder output from all 47 species
Gb_41440	SUVH5, SGD9	class V/Su(var) histone methyltransferase component of...	0.04	OrthoFinder output from all 47 species
Nbi_g07201	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Solyc02g094520.3.1	SDG33, SUVH4,...	class V/Su(var) histone methyltransferase component of...	0.05	OrthoFinder output from all 47 species
Solyc08g077940.2.1	SUVH5, SGD9,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Solyc12g096990.2.1	SET22, SDG22,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Tin_g09790	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Zm00001e033130_P002	SUVH3, SDG19,...	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001214	SET_dom	456	592
IPR007728	Pre-SET_dom	337	437
IPR003105	SRA_YDG	152	305

External Links

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LOC_Os08g45130.1 (SET22, SDG22, SUVH9,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation