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  5. LOC_Os08g44200.1

LOC_Os08g44200.1 (ECT5, LOC_Os08g44200)


Aliases : ECT5, LOC_Os08g44200

Description : methylation reader (ECT)


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44200.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g018882 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47637 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36173 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1000.g094978 ECT8 not classified & original description: CDS=129-1607 0.02 OrthoFinder output from all 47 species
Ehy_g01497 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036696001 ECT8 No description available 0.03 OrthoFinder output from all 47 species
MA_10429321g0010 ECT7 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Pnu_g16704 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19392 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003691 ECT8 methylation reader *(ECT) & original description: CDS=367-2349 0.03 OrthoFinder output from all 47 species
Tin_g06830 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021575_P001 ECT5, Zm00001e021575 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Zm00001e021892_P001 ECT7, Zm00001e021892 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 385 523
No external refs found!