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  5. LOC_Os08g42540.1

LOC_Os08g42540.1 (LOC_Os08g42540)


Aliases : LOC_Os08g42540

Description : C65 Otubain-type ubiquitin peptidase. deubiquinating protease (OTU1)


Gene families : OG0004446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42540.1

Target Alias Description ECC score Gene Family Method Actions
Als_g07115 No alias deubiquinating protease *(OTU1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29363 No alias deubiquinating protease *(OTU1) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23920 No alias deubiquinating protease *(OTU1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001087001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Ore_g20400 No alias deubiquinating protease *(OTU1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00454 No alias deubiquinating protease *(OTU1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24909 No alias deubiquinaTing protease *(OTU1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
InterPro domains Description Start Stop
IPR019400 Peptidase_C65_otubain 26 273
No external refs found!