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  5. LOC_Os08g38850.2

LOC_Os08g38850.2 (LOC_Os08g38850)


Aliases : LOC_Os08g38850

Description : Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana (sp|f4jva6|sfh6_arath : 463.0)


Gene families : OG0000242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g38850.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g033832 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Adi_g087449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11010 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Als_g32059 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Als_g62335 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12578.t1 Aspi01Gene12578 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36229.t1 Aspi01Gene36229 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G028100.1 ATSFH12, SFH12,... phosphoinositide transfer protein *(SFH) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g04329 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08519 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01018887001 ATSFH12, SFH12 Phosphatidylinositol/phosphatidylcholine transfer... 0.06 OrthoFinder output from all 47 species
Len_g04311 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g02867 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05023 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Sam_g04362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51534 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003441_P001 Zm00001e003441 Phosphatidylinositol/phosphatidylcholine transfer... 0.05 OrthoFinder output from all 47 species
Zm00001e010043_P001 Zm00001e010043 Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Zm00001e032300_P004 Zm00001e032300 Phosphatidylinositol/phosphatidylcholine transfer... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 136 302
IPR011074 CRAL/TRIO_N_dom 86 112
No external refs found!