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  5. LOC_Os08g37350.1

LOC_Os08g37350.1 (UBP17, LOC_Os08g37350)


Aliases : UBP17, LOC_Os08g37350

Description : deubiquitinase (UBP15-21)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g37350.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00220330 UBP20,... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
Adi_g013898 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013899 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077157 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30011 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14073 UBP23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32497 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04917 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034212 UBP23 deubiquitinase *(UBP23) & original description: CDS=342-2441 0.03 OrthoFinder output from all 47 species
Cba_g07711 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14993 UBP23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G085100.1 UBP23, Ceric.03G085100 deubiquitinase *(UBP23) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.15G035800.1 UBP19, Ceric.15G035800 deubiquitinase *(UBP15-21) & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g23037 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09670 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
LOC_Os06g44380.1 UBP19, LOC_Os06g44380 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
Lfl_g09709 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11163 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10246077g0010 UBP17 Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_132593g0020 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_53569g0010 UBP23 deubiquitinase (UBP23) 0.03 OrthoFinder output from all 47 species
Ore_g22576 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27762 No alias deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003832_P001 UBP17, Zm00001e003832 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
Zm00001e014332_P001 UBP15, Zm00001e014332 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Zm00001e022516_P001 UBP17, Zm00001e022516 deubiquitinase (UBP15-21) 0.07 OrthoFinder output from all 47 species
Zm00001e024878_P003 UBP15, Zm00001e024878 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Zm00001e027381_P003 UBP25, Zm00001e027381 deubiquitinase (UBP25) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 450 753
IPR002893 Znf_MYND 123 160
No external refs found!