LOC_Os08g36380.1 (LOC_Os08g36380)


Aliases : LOC_Os08g36380

Description : no hits & (original description: none)


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g36380.1

Target Alias Description ECC score Gene Family Method Actions
AT1G14630 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT2G01990 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Als_g00580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00492 XRI1, XRI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48552.t1 Aspi01Gene48552 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70153.t1 Aspi01Gene70153 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_13397 No alias Protein XRI1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24932 XRI1, XRI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28906 XRI1, XRI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003769_P004 Zm00001e003769 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e009938_P001 Zm00001e009938 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e034311_P001 Zm00001e034311 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!