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  5. LOC_Os08g33710.1

LOC_Os08g33710.1 (RNS3, LOC_Os08g33710)


Aliases : RNS3, LOC_Os08g33710

Description : Extracellular ribonuclease LE OS=Solanum lycopersicum (sp|p80022|rnle_sollc : 281.0)


Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33710.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262550 evm_27.TU.AmTr_v1... Extracellular ribonuclease LE OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AT1G26820 RNS3 ribonuclease 3 0.03 OrthoFinder output from all 47 species
Aop_g15509 No alias T2-type RNase *(RNS) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00279.t1 ATRNS1, RNS1,... T2-type RNase *(RNS) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G011400.1 ATRNS1, RNS1,... T2-type RNase *(RNS) & original description:... 0.01 OrthoFinder output from all 47 species
Cre03.g160953 PGP1, ABCB1, ATPGP1 No description available 0.01 OrthoFinder output from all 47 species
Ehy_g11678 RNS2 T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01128 ATRNS1, RNS1 Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_27893 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_30836 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_41024 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g04568 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
MA_95383g0020 ATRNS1, RNS1 Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g03541 ATRNS1, RNS1 T2-type RNase *(RNS) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007940.3.1 ATRNS1, RNS1,... Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc05g007950.4.1 ATRNS1, RNS1,... Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e004122_P001 RNS3, Zm00001e004122 Ribonuclease 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 27 211
No external refs found!