LOC_Os08g28570.1 (LOC_Os08g28570)

Aliases : LOC_Os08g28570

Description : no description available(sp|q2r8l1|rga5s_orysj : 394.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g28570.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00058p00097500	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00205780	evm_27.TU.AmTr_v1...	Putative disease resistance RPP13-like protein 3...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00207600	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00090p00087950	RPP13,...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
AMTR_s00090p00137350	RPP13,...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00205p00026120	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.02	OrthoFinder output from all 47 species
AT1G58390	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.08	OrthoFinder output from all 47 species
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.04	OrthoFinder output from all 47 species
GSVIVT01018564001	No alias	Putative disease resistance RPP13-like protein 3...	0.03	OrthoFinder output from all 47 species
GSVIVT01024101001	RPP13	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01024102001	RPP13	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01024114001	No alias	External stimuli response.biotic stress.pathogen...	0.02	OrthoFinder output from all 47 species
GSVIVT01032824001	No alias	Putative disease resistance protein At1g50180...	0.03	OrthoFinder output from all 47 species
GSVIVT01032827001	No alias	Putative disease resistance protein At1g50180...	0.03	OrthoFinder output from all 47 species
GSVIVT01032828001	No alias	Putative disease resistance protein At1g50180...	0.02	OrthoFinder output from all 47 species
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.03	OrthoFinder output from all 47 species
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.04	OrthoFinder output from all 47 species
Gb_40740	RPM1, RPS3	Putative disease resistance protein RGA3 OS=Solanum...	0.04	OrthoFinder output from all 47 species
LOC_Os02g35210.1	LOC_Os02g35210	no description available(sp\|q2r8l1\|rga5s_orysj : 458.0)	0.03	OrthoFinder output from all 47 species
LOC_Os04g02120.1	LOC_Os04g02120	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os06g48520.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os08g14810.1	ZAR1, LOC_Os08g14810	no description available(sp\|p0do08\|pikm2_orysj : 132.0)	0.06	OrthoFinder output from all 47 species
LOC_Os09g09490.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g11960.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
LOC_Os11g11990.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
LOC_Os11g12000.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g12320.1	ZAR1, LOC_Os11g12320	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os11g12340.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
LOC_Os11g12350.1	LOC_Os11g12350	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g13430.1	LOC_Os11g13430	no description available(sp\|q2r8l1\|rga5s_orysj : 385.0)	0.03	OrthoFinder output from all 47 species
LOC_Os11g13440.1	LOC_Os11g13440	no description available(sp\|q2r8l1\|rga5s_orysj : 304.0)	0.04	OrthoFinder output from all 47 species
LOC_Os11g16470.2	LOC_Os11g16470	no description available(sp\|q2r8l1\|rga5s_orysj : 400.0)	0.04	OrthoFinder output from all 47 species
LOC_Os11g16510.1	LOC_Os11g16510	no description available(sp\|p0do08\|pikm2_orysj : 87.0)	0.04	OrthoFinder output from all 47 species
LOC_Os11g46140.1	LOC_Os11g46140	no description available(sp\|f7j0n2\|rga5r_orysj : 149.0)	0.03	OrthoFinder output from all 47 species
LOC_Os12g37760.1	LOC_Os12g37760	no description available(sp\|p0do08\|pikm2_orysj : 370.0)	0.03	OrthoFinder output from all 47 species
Solyc01g086810.2.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc03g005670.3.1	Solyc03g005670	Disease resistance RPP8-like protein 3 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc04g009110.1.1	RPP13, Solyc04g009110	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc04g009240.2.1	RPP13, Solyc04g009240	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc04g009250.1.1	RPP13, Solyc04g009250	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc04g009290.1.1	RPP13, Solyc04g009290	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc04g009660.2.1	RPP13, Solyc04g009660	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc04g009690.2.1	RPP13, Solyc04g009690	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc04g025820.1.1	RPP13, Solyc04g025820	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc07g053010.3.1	ZAR1, Solyc07g053010	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc08g005440.3.1	RPM1, RPS3,...	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.05	OrthoFinder output from all 47 species
Solyc12g096920.1.1	Solyc12g096920	Probable disease resistance RPP8-like protein 2...	0.02	OrthoFinder output from all 47 species
Zm00001e008806_P001	Zm00001e008806	no description available(sp\|q2r8l1\|rga5s_orysj : 238.0)	0.06	OrthoFinder output from all 47 species
Zm00001e010878_P001	RPM1, RPS3,...	no description available(sp\|q2r8l1\|rga5s_orysj : 230.0)	0.03	OrthoFinder output from all 47 species
Zm00001e011354_P001	Zm00001e011354	no description available(sp\|p0do08\|pikm2_orysj : 121.0)	0.05	OrthoFinder output from all 47 species
Zm00001e020947_P001	Zm00001e020947	Putative disease resistance protein RGA4 OS=Solanum...	0.02	OrthoFinder output from all 47 species
Zm00001e024479_P001	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	146	373
IPR041118	Rx_N	12	96

External Links

No external refs found!

LOC_Os08g28570.1 (LOC_Os08g28570)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation