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  5. LOC_Os08g27070.1

LOC_Os08g27070.1 (LOC_Os08g27070)


Aliases : LOC_Os08g27070

Description : Hsp90-co-chaperone (P23)


Gene families : OG0000557 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000557_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g27070.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00215950 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Aob_g04955 No alias Hsp90-co-chaperone *(P23) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g66999 No alias Hsp90-co-chaperone *(P23) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G076800.1 Ceric.32G076800 Hsp90-co-chaperone *(P23) & original description:... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.35 No alias External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.36 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01027988001 No alias External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007052 CS_dom 6 81
No external refs found!