Coexpression cluster: Cluster_146 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 14.04% (8/57) 5.25 0.0 0.0
GO:0016070 RNA metabolic process 14.04% (8/57) 3.94 0.0 3e-06
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 3.51% (2/57) 9.53 2e-06 3.9e-05
GO:0034457 Mpp10 complex 3.51% (2/57) 9.53 2e-06 3.9e-05
GO:0090304 nucleic acid metabolic process 14.04% (8/57) 3.33 1e-06 4.6e-05
GO:0034470 ncRNA processing 7.02% (4/57) 5.4 3e-06 4.7e-05
GO:0006364 rRNA processing 5.26% (3/57) 6.47 5e-06 7.2e-05
GO:0016072 rRNA metabolic process 5.26% (3/57) 6.47 5e-06 7.2e-05
GO:0006139 nucleobase-containing compound metabolic process 14.04% (8/57) 2.97 8e-06 9.5e-05
GO:0006725 cellular aromatic compound metabolic process 14.04% (8/57) 2.83 1.5e-05 0.00014
GO:0046483 heterocycle metabolic process 14.04% (8/57) 2.85 1.4e-05 0.000142
GO:1990904 ribonucleoprotein complex 5.26% (3/57) 6.03 1.4e-05 0.000149
GO:1901360 organic cyclic compound metabolic process 14.04% (8/57) 2.8 1.8e-05 0.000152
GO:0034660 ncRNA metabolic process 7.02% (4/57) 4.52 2.9e-05 0.000228
GO:0034641 cellular nitrogen compound metabolic process 14.04% (8/57) 2.41 0.000122 0.000893
GO:0016553 base conversion or substitution editing 1.75% (1/57) 9.53 0.001351 0.007431
GO:0002100 tRNA wobble adenosine to inosine editing 1.75% (1/57) 9.53 0.001351 0.007431
GO:0006382 adenosine to inosine editing 1.75% (1/57) 9.53 0.001351 0.007431
GO:0008251 tRNA-specific adenosine deaminase activity 1.75% (1/57) 9.53 0.001351 0.007431
GO:0006397 mRNA processing 3.51% (2/57) 5.25 0.001287 0.008847
GO:0016071 mRNA metabolic process 3.51% (2/57) 4.98 0.001864 0.009766
GO:0030688 preribosome, small subunit precursor 1.75% (1/57) 8.53 0.0027 0.012915
GO:0004000 adenosine deaminase activity 1.75% (1/57) 8.53 0.0027 0.012915
GO:0140513 nuclear protein-containing complex 3.51% (2/57) 4.07 0.006372 0.029206
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.75% (1/57) 6.95 0.00808 0.034183
GO:0002097 tRNA wobble base modification 1.75% (1/57) 6.95 0.00808 0.034183
GO:0019239 deaminase activity 1.75% (1/57) 6.72 0.00942 0.038377
GO:0030684 preribosome 1.75% (1/57) 6.53 0.010758 0.042265
GO:0031047 RNA-mediated gene silencing 1.75% (1/57) 6.21 0.01343 0.049244
GO:0044237 cellular metabolic process 17.54% (10/57) 1.15 0.013066 0.049561
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_153 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_9 0.015 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_139 0.02 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_168 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_10 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_98 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.032 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_139 0.022 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_164 0.02 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_115 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_35 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_85 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_44 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_62 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_128 0.027 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_169 0.02 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_41 0.015 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_56 0.035 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_2 0.05 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_3 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_5 0.021 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_6 0.027 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_7 0.03 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_15 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_19 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_23 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_25 0.023 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_31 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_32 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_33 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_49 0.034 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.027 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_72 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_74 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_91 0.024 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_96 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_107 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_126 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_133 0.029 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_150 0.017 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_167 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_209 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_251 0.017 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_288 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_301 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_103 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_224 0.021 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_360 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_116 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_19 0.021 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_74 0.054 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.021 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_69 0.022 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_75 0.021 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_105 0.043 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_170 0.033 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_24 0.047 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_118 0.022 OrthoFinder output from all 47 species Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms