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  5. LOC_Os08g25700.1

LOC_Os08g25700.1 (LOC_Os08g25700)


Aliases : LOC_Os08g25700

Description : no hits & (original description: none)


Gene families : OG0005137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g25700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00196670 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G04360 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
Adi_g012682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G010500.1 Ceric.16G010500 not classified & original description: pacid=50588889... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.19 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre05.g234750 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030118001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_40012 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g20236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022153_P001 Zm00001e022153 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!