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  5. LOC_Os08g25390.1

LOC_Os08g25390.1 (AK-HSDH, AK-HSDH II,...)


Aliases : AK-HSDH, AK-HSDH II, LOC_Os08g25390

Description : bifunctional homoserine dehydrogenase and aspartate kinase


Gene families : OG0002659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g25390.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT4G19710 AK-HSDH, AK-HSDH II aspartate kinase-homoserine dehydrogenase ii 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.35 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre02.g109550 AK-HSDH, AK-HSDH II Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder output from all 47 species
Mp6g10000.1 AK-HSDH, AK-HSDH II bifunctional homoserine dehydrogenase and aspartate kinase 0.04 OrthoFinder output from all 47 species
Mp6g10010.1 AK-HSDH, AK-HSDH II bifunctional homoserine dehydrogenase and aspartate kinase 0.05 OrthoFinder output from all 47 species
Pp3c25_5870V3.1 AK-HSDH, AK-HSDH... aspartate kinase-homoserine dehydrogenase ii 0.02 OrthoFinder output from all 47 species
Solyc11g040380.2.1 AK-HSDH, AK-HSDH... Bifunctional aspartokinase/homoserine dehydrogenase,... 0.05 OrthoFinder output from all 47 species
Solyc11g040390.2.1 AK-HSDH, AK-HSDH... bifunctional homoserine dehydrogenase and aspartate kinase 0.1 OrthoFinder output from all 47 species
Tin_g03514 AK-HSDH, AK-HSDH I EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001048 Asp/Glu/Uridylate_kinase 94 377
IPR001342 HDH_cat 713 911
IPR002912 ACT_dom 421 472
IPR005106 Asp/hSer_DH_NAD-bd 569 705
IPR027795 CASTOR_ACT_dom 490 551
No external refs found!