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Aliases : LOC_Os08g24260
Description : no hits & (original description: none)
Gene families : OG0002640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002640_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g24260.1 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ChrSy.fgenesh.mRNA.23 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g03240.1 | LOC_Os03g03240 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g10190.1 | LOC_Os04g10190 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g24080.1 | LOC_Os04g24080 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g49810.1 | LOC_Os04g49810 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g53270.1 | LOC_Os04g53270 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g16680.1 | LOC_Os05g16680 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g31430.1 | LOC_Os05g31430 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g14600.1 | LOC_Os06g14600 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g45530.1 | LOC_Os06g45530 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g27300.1 | LOC_Os08g27300 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g29920.1 | LOC_Os08g29920 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g22350.1 | LOC_Os09g22350 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g31600.1 | LOC_Os10g31600 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g15100.1 | LOC_Os11g15100 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g28720.1 | LOC_Os11g28720 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g37330.1 | LOC_Os12g37330 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
| BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
| BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0008061 | chitin binding | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |